| The genome sequence of the malaria mosquito Anopheles gambiae RA Holt, GM Subramanian, A Halpern, GG Sutton, R Charlab, ... science 298 (5591), 129-149, 2002 | 2597 | 2002 |
| A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea D Wu, P Hugenholtz, K Mavromatis, R Pukall, E Dalin, NN Ivanova, ... Nature 462 (7276), 1056-1060, 2009 | 1094 | 2009 |
| Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils NL Ward, JF Challacombe, PH Janssen, B Henrissat, PM Coutinho, M Wu, ... Applied and environmental microbiology 75 (7), 2046-2056, 2009 | 1069 | 2009 |
| The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria TD Read, SN Peterson, N Tourasse, LW Baillie, IT Paulsen, KE Nelson, ... Nature 423 (6935), 81-86, 2003 | 1000 | 2003 |
| Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements M Wu, LV Sun, J Vamathevan, M Riegler, R Deboy, JC Brownlie, ... PLoS biology 2 (3), e69, 2004 | 997 | 2004 |
| Genome of Geobacter sulfurreducens: metal reduction in subsurface environments BA Methe, KE Nelson, JA Eisen, IT Paulsen, W Nelson, JF Heidelberg, ... Science 302 (5652), 1967-1969, 2003 | 878 | 2003 |
| Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ... PLoS biology 4 (9), e286, 2006 | 876 | 2006 |
| Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates DB Sloan, AJ Alverson, JP Chuckalovcak, M Wu, DE McCauley, ... PLoS biology 10 (1), e1001241, 2012 | 621 | 2012 |
| The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses BA Methé, KE Nelson, JW Deming, B Momen, E Melamud, X Zhang, ... Proceedings of the National Academy of Sciences 102 (31), 10913-10918, 2005 | 616 | 2005 |
| Comparative genomics of emerging human ehrlichiosis agents JCD Hotopp, M Lin, R Madupu, J Crabtree, SV Angiuoli, J Eisen, ... PLoS genetics 2 (2), e21, 2006 | 585 | 2006 |
| Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance SW Kembel, M Wu, JA Eisen, JL Green PLoS computational biology 8 (10), e1002743, 2012 | 570 | 2012 |
| A simple, fast, and accurate method of phylogenomic inference M Wu, JA Eisen Genome biology 9 (10), R151, 2008 | 570 | 2008 |
| Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2 M Wu, AJ Scott Bioinformatics 28 (7), 1033-1034, 2012 | 470 | 2012 |
| Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades R Seshadri, SW Joseph, AK Chopra, J Sha, J Shaw, J Graf, D Haft, M Wu, ... Journal of bacteriology 188 (23), 8272-8282, 2006 | 453 | 2006 |
| Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath) N Ward, Ø Larsen, J Sakwa, L Bruseth, H Khouri, AS Durkin, G Dimitrov, ... PLoS biology 2 (10), e303, 2004 | 408 | 2004 |
| The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium JA Eisen, KE Nelson, IT Paulsen, JF Heidelberg, M Wu, RJ Dodson, ... Proceedings of the National Academy of Sciences 99 (14), 9509-9514, 2002 | 406 | 2002 |
| Microbiota alteration is associated with the development of stress-induced despair behavior IA Marin, JE Goertz, T Ren, SS Rich, S Onengut-Gumuscu, E Farber, ... Scientific Reports 7, 2017 | 378 | 2017 |
| Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901 M Wu, Q Ren, AS Durkin, SC Daugherty, LM Brinkac, RJ Dodson, ... PLoS genetics 1 (5), e65, 2005 | 299 | 2005 |
| Accounting for alignment uncertainty in phylogenomics M Wu, S Chatterji, JA Eisen PloS one 7 (1), e30288, 2012 | 224 | 2012 |
| An integrated phylogenomic approach toward pinpointing the origin of mitochondria Z Wang, M Wu Scientific reports 5 (1), 7949, 2015 | 189 | 2015 |
Jonathan A. EisenProfessor, University of California, Davis (UC Davis), Department of Evolution and EcologyVerified email at ucdavis.edu
