| Fast neighbor lists for adaptive-resolution particle simulations O Awile, F Büyükkeçeci, S Reboux, IF Sbalzarini Computer Physics Communications 183 (5), 1073-1081, 2012 | 38 | 2012 |
| Modernizing the NEURON simulator for sustainability, portability, and performance O Awile, P Kumbhar, N Cornu, S Dura-Bernal, JG King, O Lupton, ... Frontiers in Neuroinformatics 16, 884046, 2022 | 37 | 2022 |
| Toward an Object‐Oriented Core of the PPM Library O Awile, Ö Demirel, IF Sbalzarini AIP Conference Proceedings 1281 (1), 1313-1316, 2010 | 28 | 2010 |
| Intrinsically Disordered Regions May Lower the Hydration Free Energy in Proteins: A Case Study of Nudix Hydrolase in the Bacterium Deinococcus radiodurans O Awile, A Krisko, IF Sbalzarini, B Zagrovic PLoS computational biology 6 (7), e1000854, 2010 | 26 | 2010 |
| A domain-specific programming language for particle simulations on distributed-memory parallel computers O Awile, M Mitrovic, S Reboux, IF Sbalzarini PARTICLES III: proceedings of the III International Conference on Particle …, 2013 | 20 | 2013 |
| Modeling and simulation of neocortical micro-and mesocircuitry. Part II: Physiology and experimentation JB Isbister, A Ecker, C Pokorny, S Bolaños-Puchet, DE Santander, ... bioRxiv, 2023.05. 17.541168, 2023 | 15 | 2023 |
| Deploying and optimizing embodied simulations of large-scale spiking neural networks on HPC infrastructure B Feldotto, JM Eppler, C Jimenez-Romero, C Bignamini, CE Gutierrez, ... Frontiers in neuroinformatics 16, 884180, 2022 | 14 | 2022 |
| A portable OpenCL implementation of generic particle–mesh and mesh–particle interpolation in 2D and 3D F Büyükkeçeci, O Awile, IF Sbalzarini Parallel Computing 39 (2), 94-111, 2013 | 12 | 2013 |
| CoreNEURON: performance and energy efficiency evaluation on intel and arm CPUs J Criado, M Garcia-Gasulla, P Kumbhar, O Awile, I Magkanaris, ... 2020 IEEE international conference on cluster computing (CLUSTER), 540-548, 2020 | 9 | 2020 |
| A high-throughput Kalman filter for modern SIMD architectures DH Cámpora Pérez, O Awile, C Potterat Euro-Par 2017: Parallel Processing Workshops: Euro-Par 2017 International …, 2018 | 8 | 2018 |
| A domain-specific language and scalable middleware for particle-mesh simulations on heterogeneous parallel computers O Awile ETH Zurich, 2013 | 8 | 2013 |
| Method and apparatus for using design specifications and measurements on manufactured products in conceptual design models O Awile, L Balmelli, F Kitayama, M Numao US Patent App. 11/866,782, 2009 | 8 | 2009 |
| An efficient low‐rank Kalman filter for modern SIMD architectures DH Campora Perez, O Awile Concurrency and Computation: Practice and Experience 30 (23), e4483, 2018 | 7 | 2018 |
| A connectome manipulation framework for the systematic and reproducible study of structure–function relationships through simulations C Pokorny, O Awile, JB Isbister, K Kurban, M Wolf, MW Reimann Network Neuroscience, 1-51, 2024 | 6 | 2024 |
| An optimizing multi-platform source-to-source compiler framework for the NEURON MODeling language P Kumbhar, O Awile, L Keegan, JB Alonso, J King, M Hines, F Schürmann International Conference on Computational Science, 45-58, 2020 | 6 | 2020 |
| A pthreads wrapper for fortran 2003 O Awile, IF Sbalzarini ACM Transactions on Mathematical Software (TOMS) 40 (3), 1-15, 2014 | 3 | 2014 |
| STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale W Chen, T Carel, O Awile, N Cantarutti, G Castiglioni, A Cattabiani, ... Frontiers in Neuroinformatics 16, 883742, 2022 | 2 | 2022 |
| Cross-architecture Kalman filter benchmarks on modern hardware platforms DHC Pérez, O Awile, O Bouizi, N Neufeld Journal of Physics: Conference Series 1085 (3), 032046, 2018 | 2 | 2018 |
| Parallelizing and Optimizing LHCb-Kalman for Intel Xeon Phi KNL Processors P Fernández, D del Rio Astorga, MF Dolz, J Fernández, O Awile, ... 2018 26th Euromicro International Conference on Parallel, Distributed and …, 2018 | 2 | 2018 |
| STEPS.: Fast and memory-efficient molecular simulations of neurons at the nanoscale W Chen, T Carel, O Awile, N Cantarutti, G Castiglioni, A Cattabiani, ... Neuroscience, computing, performance, and benchmarks: Why it matters to …, 2023 | 1 | 2023 |
Ivo F. SbalzariniTU Dresden & Max Planck Institute of Molecular Cell Biology and GeneticsVerified email at mpi-cbg.de
