Linformer: Self-attention with linear complexity S Wang, BZ Li, M Khabsa, H Fang, H Ma arXiv preprint arXiv:2006.04768, 2020 | 1719 | 2020 |
GenomeScope: fast reference-free genome profiling from short reads GW Vurture, FJ Sedlazeck, M Nattestad, CJ Underwood, H Fang, ... Bioinformatics 33 (14), 2202-2204, 2017 | 1412 | 2017 |
Accurate detection of complex structural variations using single molecule sequencing FJ Sedlazeck, P Rescheneder, M Smolka, H Fang, M Nattestad, ... Nature Methods, 2017 | 1376 | 2017 |
Accurate de novo and transmitted indel detection in exome-capture data using microassembly G Narzisi, JA O'rawe, I Iossifov, H Fang, Y Lee, Z Wang, Y Wu, GJ Lyon, ... Nature methods 11 (10), 1033-1036, 2014 | 242 | 2014 |
Entailment as few-shot learner S Wang, H Fang, M Khabsa, H Mao, H Ma arXiv preprint arXiv:2104.14690, 2021 | 202 | 2021 |
Reducing INDEL calling errors in whole genome and exome sequencing data H Fang, Y Wu, G Narzisi, JA O’Rawe, LTJ Barrón, J Rosenbaum, ... Genome Medicine 6 (10), 89, 2014 | 202 | 2014 |
Microestimates of wealth for all low-and middle-income countries G Chi, H Fang, S Chatterjee, JE Blumenstock Proceedings of the National Academy of Sciences 119 (3), e2113658119, 2022 | 192 | 2022 |
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line M Nattestad, S Goodwin, K Ng, T Baslan, FJ Sedlazeck, P Rescheneder, ... Genome research 28 (8), 1126-1135, 2018 | 185 | 2018 |
TAF1 variants are associated with dysmorphic features, intellectual disability, and neurological manifestations JA O’Rawe, Y Wu, MJ Dörfel, AF Rope, PYB Au, JS Parboosingh, S Moon, ... The American Journal of Human Genetics 97 (6), 922-932, 2015 | 140 | 2015 |
Effective long-context scaling of foundation models W Xiong, J Liu, I Molybog, H Zhang, P Bhargava, R Hou, L Martin, ... arXiv preprint arXiv:2309.16039, 2023 | 123 | 2023 |
Indel variant analysis of short-read sequencing data with Scalpel H Fang, EA Grabowska, K Arora, V Vacic, MC Zody, I Iossifov, JA ORawe, ... Nature Protocols 12 (11), 2529–2548, 2016 | 120 | 2016 |
Scikit-ribo enables accurate estimation and robust modeling of translation dynamics at codon resolution H Fang, YF Huang, A Radhakrishnan, A Siepel, GJ Lyon, MC Schatz Cell systems 6 (2), 180-191. e4, 2018 | 46 | 2018 |
Self-attention with linear complexity. arXiv 2020 S Wang, BZ Li, M Khabsa, H Fang, HL Ma arXiv preprint arXiv:2006.04768, 0 | 36 | |
Whole genome sequencing of one complex pedigree illustrates challenges with genomic medicine H Fang, Y Wu, H Yang, M Yoon, LT Jiménez-Barrón, D Mittelman, ... BMC medical genomics 10, 1-16, 2017 | 21 | 2017 |
Linformer: self-attention with linear complexity (2020) S Wang, BZ Li, M Khabsa, H Fang, H Ma arXiv preprint arXiv:2006.04768, 2006 | 21 | 2006 |
Integrating precision medicine in the study and clinical treatment of a severely mentally ill person JA O’Rawe, H Fang, S Rynearson, R Robison, ES Kiruluta, G Higgins, ... PeerJ 1, e177, 2013 | 20 | 2013 |
Bayesformer: Transformer with uncertainty estimation KA Sankararaman, S Wang, H Fang arXiv preprint arXiv:2206.00826, 2022 | 18 | 2022 |
Proteomic and genomic characterization of a yeast model for Ogden syndrome MJ Dörfel, H Fang, J Crain, M Klingener, J Weiser, GJ Lyon Yeast 34 (1), 19-37, 2017 | 17 | 2017 |
Linformer: Self-attention with linear complexity. CoRR abs/2006.04768 (2020) S Wang, BZ Li, M Khabsa, H Fang, H Ma | 11 | 2006 |
Genome-wide variant analysis of simplex autism families with an integrative clinical-bioinformatics pipeline LT Jiménez-Barrón, JA O'Rawe, Y Wu, M Yoon, H Fang, I Iossifov, ... Molecular Case Studies 1 (1), a000422, 2015 | 9 | 2015 |