The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Čech, ... Nucleic acids research 44 (W1), W3-W10, 2016 | 2160 | 2016 |
A panel of novel detection and prognostic methylated DNA markers in primary non–small cell lung cancer and serum DNA A Ooki, Z Maleki, JCJ Tsay, C Goparaju, M Brait, N Turaga, HS Nam, ... Clinical Cancer Research 23 (22), 7141-7152, 2017 | 165 | 2017 |
Toward a gold standard for benchmarking gene set enrichment analysis L Geistlinger, G Csaba, M Santarelli, M Ramos, L Schiffer, N Turaga, ... Briefings in Bioinformatics, 2020 | 123 | 2020 |
Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ... Cell Genomics 2 (1), 2022 | 113 | 2022 |
BiocParallel: Bioconductor facilities for parallel evaluation M Morgan, V Obenchain, M Lang, R Thompson, N Turaga R package version 1 (1), 2014 | 54 | 2014 |
Butyrylcholinesterase in metabolic syndrome GR Sridhar, AA Rao, K Srinivas, G Nirmala, G Lakshmi, D Suryanarayna, ... Medical hypotheses 75 (6), 648-651, 2010 | 47 | 2010 |
High expression of SLCO2B1 is associated with prostate cancer recurrence after radical prostatectomy T Terakawa, E Katsuta, L Yan, N Turaga, KA McDonald, M Fujisawa, ... Oncotarget 9 (18), 14207, 2018 | 37 | 2018 |
Molecular triage of premalignant lesions in liquid-based cervical cytology and circulating cell-free DNA from urine, using a panel of methylated human papilloma virus and host … R Guerrero-Preston, BL Valle, A Jedlicka, N Turaga, O Folawiyo, F Pirini, ... Cancer Prevention Research 9 (12), 915-924, 2016 | 36 | 2016 |
Global Alliance for Genomics and Health Meets Bioconductor: Toward Reproducible and Agile Cancer Genomics at Cloud Scale VJ Carey, M Ramos, BJ Stubbs, S Gopaulakrishnan, S Oh, N Turaga, ... JCO Clinical Cancer Informatics 4, 472-479, 2020 | 7 | 2020 |
Promoter DNA methylation patterns in oral, laryngeal and oropharyngeal anatomical regions are associated with tumor differentiation, nodal involvement and survival B Rivera‑Peña, O Folawiyo, N Turaga, RJ Rodríguez‑Benítez, ME Felici, ... Oncology Letters 27 (3), 1-15, 2024 | 3 | 2024 |
Orchestrating a community-developed computational workshop and accompanying training materials S Davis, M Ramos, L Shepherd, N Turaga, L Geistlinger, MT Morgan, ... F1000Research 7, 2018 | 2 | 2018 |
A guide and best practices for R/Bioconductor tool integration in Galaxy N Turaga, MA Freeberg, D Baker, J Chilton, A Nekrutenko, J Taylor, ... F1000Research 5 (2757), 2757, 2016 | 2 | 2016 |
The Rockerverse: Packages and Applications for Containerisation with R D Nust, D Eddelbuettel, D Bennett, R Cannoodt, D Clark, G Daroczi, ... R JOURNAL 12 (1), 437-461, 2020 | 1 | 2020 |
Promoter DNA methylation patterns in oral, laryngeal, and oropharyngeal anatomical regions are associated with tumor differentiation, nodal involvement, and survival in Latinos BI Rivera-Peña, O Folawiyo, N Turaga, RJ Rodríguez-Benítez, ME Felici, ... Cancer Research 83 (7_Supplement), 5765-5765, 2023 | | 2023 |
BioinforMagic: Marrying Galaxy and Bioconductor N Turaga, MA Freeberg F1000Research 5, 2016 | | 2016 |
Get your own Galaxy within minutes E Afgan, N Turaga, N Goonasekera F1000Research 5, 2016 | | 2016 |
Triage of high risk HPV positive women before colposcopy with reflex tests in pap smears and screening of high risk HPV in Transrenal DNA isolated from urine, using novel … RE Guerrero-Preston, BL Valle, A Jedlicka, N Turaga, L Florea, ... CANCER RESEARCH 76, 2016 | | 2016 |
Viral and host gene methylation in liquid prep: novel molecular screening and triage tools to reduce cervical cancer disparities R Guerrero-Preston, A Jedlicka, BL Valle, N Turaga, L Florea, O Folawiyo, ... CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION 25 (3), 2016 | | 2016 |
Promoter methylation, stage at presentation, and neighborhood-level effects are linked to survival disparities in HNSCC patients FP Lawson, O Folawiyo, BL Valle, F Pirini, N Turaga, D Sidransky, ... CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION 25 (3), 2016 | | 2016 |
Genome-wide analysis identified differentially methylated regions in head and neck squamous cell carcinoma anatomic subsites BL Rivera, O Folawiyo, N Turaga, F Pirini, R Lopez, R Vazquez, ... CANCER RESEARCH 75, 2015 | | 2015 |