Dana Opulente
Dana Opulente
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Tempo and mode of genome evolution in the budding yeast subphylum
XX Shen, DA Opulente, J Kominek, X Zhou, JL Steenwyk, KV Buh, ...
Cell 175 (6), 1533-1545. e20, 2018
A molecular portrait of de novo genes in yeasts
N Vakirlis, AS Hebert, DA Opulente, G Achaz, CT Hittinger, G Fischer, ...
Molecular biology and evolution 35 (3), 631-645, 2018
Genome-scale phylogeny and contrasting modes of genome evolution in the fungal phylum Ascomycota
XX Shen, JL Steenwyk, AL LaBella, DA Opulente, X Zhou, J Kominek, Y Li, ...
Science Advances 6 (45), eabd0079, 2020
Extensive loss of cell-cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts
JL Steenwyk, DA Opulente, J Kominek, XX Shen, X Zhou, AL Labella, ...
PLoS Biology 17 (5), e3000255, 2019
Eukaryotic acquisition of a bacterial operon
J Kominek, DT Doering, DA Opulente, XX Shen, X Zhou, J DeVirgilio, ...
Cell 176 (6), 1356-1366. e10, 2019
Variation and selection on codon usage bias across an entire subphylum
AL Labella, DA Opulente, JL Steenwyk, CT Hittinger, A Rokas
PLoS genetics 15 (7), e1008304, 2019
Functional and evolutionary characterization of a secondary metabolite gene cluster in budding yeasts
DJ Krause, J Kominek, DA Opulente, XX Shen, X Zhou, QK Langdon, ...
Proceedings of the National Academy of Sciences 115 (43), 11030-11035, 2018
Fermentation innovation through complex hybridization of wild and domesticated yeasts
QK Langdon, D Peris, ECP Baker, DA Opulente, HV Nguyen, U Bond, ...
Nature Ecology & Evolution 3 (11), 1576-1586, 2019
Evolutionary instability of CUG-Leu in the genetic code of budding yeasts
T Krassowski, AY Coughlan, XX Shen, X Zhou, J Kominek, DA Opulente, ...
Nature communications 9 (1), 1887, 2018
Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage
C Gonçalves, JH Wisecaver, J Kominek, MS Oom, MJ Leandro, XX Shen, ...
Elife 7, e33034, 2018
Pathogenic budding yeasts isolated outside of clinical settings
DA Opulente, QK Langdon, KV Buh, MAB Haase, K Sylvester, RV Moriarty, ...
FEMS yeast research 19 (3), foz032, 2019
Efficient engineering of marker-free synthetic allotetraploids of Saccharomyces
WG Alexander, D Peris, BT Pfannenstiel, DA Opulente, M Kuang, ...
Fungal genetics and biology 89, 10-17, 2016
Nonlinear fitness consequences of variation in expression level of a eukaryotic gene
JS Rest, CM Morales, JB Waldron, DA Opulente, J Fisher, S Moon, ...
Molecular biology and evolution 30 (2), 448-456, 2012
Towards yeast taxogenomics: lessons from novel species descriptions based on complete genome sequences
D Libkind, N Čadež, DA Opulente, QK Langdon, CA Rosa, JP Sampaio, ...
FEMS Yeast Research 20 (6), foaa042, 2020
Factors driving metabolic diversity in the budding yeast subphylum
DA Opulente, EJ Rollinson, C Bernick-Roehr, AB Hulfachor, A Rokas, ...
BMC biology 16, 1-15, 2018
Multiple reinventions of mating-type switching during budding yeast evolution
T Krassowski, J Kominek, XX Shen, DA Opulente, X Zhou, A Rokas, ...
Current Biology 29 (15), 2555-2562. e8, 2019
A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina
M Groenewald, CT Hittinger, K Bensch, DA Opulente, XX Shen, Y Li, ...
Studies in Mycology 105 (1), 1-22, 2023
Into the wild: new yeast genomes from natural environments and new tools for their analysis
D Libkind, D Peris, FA Cubillos, JL Steenwyk, DA Opulente, QK Langdon, ...
FEMS yeast research 20 (2), foaa008, 2020
Postglacial migration shaped the genomic diversity and global distribution of the wild ancestor of lager-brewing hybrids
QK Langdon, D Peris, JI Eizaguirre, DA Opulente, KV Buh, K Sylvester, ...
PLoS Genetics 16 (4), e1008680, 2020
Yeasts from temperate forests
S Mozzachiodi, FY Bai, P Baldrian, G Bell, K Boundy‐Mills, P Buzzini, ...
Yeast 39 (1-2), 4-24, 2022
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