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Julien Mariethoz
Julien Mariethoz
SIB
Verified email at sib.swiss
Title
Cited by
Cited by
Year
UniCarbKB: building a knowledge platform for glycoproteomics
MP Campbell, R Peterson, J Mariethoz, E Gasteiger, Y Akune, ...
Nucleic acids research 42 (D1), D215-D221, 2014
1792014
GlyConnect: glycoproteomics goes visual, interactive, and analytical
D Alocci, J Mariethoz, A Gastaldello, E Gasteiger, NG Karlsson, ...
Journal of proteome research 18 (2), 664-677, 2018
1232018
UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands
F Bonnardel, J Mariethoz, S Salentin, X Robin, M Schroeder, S Perez, ...
Nucleic acids research 47 (D1), D1236-D1244, 2019
1082019
Towards a standardized bioinformatics infrastructure for N- and O-glycomics
MA Rojas-Macias, J Mariethoz, P Andersson, C Jin, V Venkatakrishnan, ...
Nature communications 10 (1), 3275, 2019
882019
Property graph vs RDF triple store: A comparison on glycan substructure search
D Alocci, J Mariethoz, O Horlacher, JT Bolleman, MP Campbell, F Lisacek
PloS one 10 (12), e0144578, 2015
812015
Glycomics@ ExPASy: bridging the gap
J Mariethoz, D Alocci, A Gastaldello, O Horlacher, E Gasteiger, ...
Molecular & Cellular Proteomics 17 (11), 2164-2176, 2018
692018
Toolboxes for a standardised and systematic study of glycans
MP Campbell, R Ranzinger, T Lütteke, J Mariethoz, CA Hayes, J Zhang, ...
BMC bioinformatics 15, 1-11, 2014
642014
Databases and associated tools for glycomics and glycoproteomics
F Lisacek, J Mariethoz, D Alocci, PM Rudd, JL Abrahams, MP Campbell, ...
High-throughput glycomics and glycoproteomics: methods and protocols, 235-264, 2017
532017
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases
SIB Members
Nucleic Acids Research, 2015
52*2015
SugarBindDB, a resource of glycan-mediated host–pathogen interactions
J Mariethoz, K Khatib, D Alocci, MP Campbell, NG Karlsson, NH Packer, ...
Nucleic acids research 44 (D1), D1243-D1250, 2016
512016
LectomeXplore, an update of UniLectin for the discovery of carbohydrate-binding proteins based on a new lectin classification
F Bonnardel, J Mariethoz, S Pérez, A Imberty, F Lisacek
Nucleic Acids Research 49 (D1), D1548-D1554, 2021
402021
A pipeline to translate glycosaminoglycan sequences into 3D models. Application to the exploration of glycosaminoglycan conformational space
O Clerc, J Mariethoz, A Rivet, F Lisacek, S Pérez, S Ricard-Blum
Glycobiology 29 (1), 36-44, 2019
402019
GlycoDigest: a tool for the targeted use of exoglycosidase digestions in glycan structure determination
L Gotz, JL Abrahams, J Mariethoz, PM Rudd, NG Karlsson, NH Packer, ...
Bioinformatics 30 (21), 3131-3133, 2014
382014
MzJava: An open source library for mass spectrometry data processing
O Horlacher, F Nikitin, D Alocci, J Mariethoz, M Müller, F Lisacek
Journal of proteomics 129, 63-70, 2015
332015
Glycoforest 1.0
O Horlacher, C Jin, D Alocci, J Mariethoz, M Müller, NG Karlsson, ...
Analytical chemistry 89 (20), 10932-10940, 2017
312017
Understanding the glycome: an interactive view of glycosylation from glycocompositions to glycoepitopes
D Alocci, M Ghraichy, E Barletta, A Gastaldello, J Mariethoz, F Lisacek
Glycobiology 28 (6), 349-362, 2018
302018
Examining and fine-tuning the selection of glycan compositions with GlyConnect Compozitor
T Robin, J Mariethoz, F Lisacek
Molecular & Cellular Proteomics 19 (10), 1602-1618, 2020
222020
SugarSketcher: quick and intuitive online glycan drawing
D Alocci, P Suchánková, R Costa, N Hory, J Mariethoz, RS Vařeková, ...
Molecules 23 (12), 3206, 2018
172018
In silico analysis of the human milk oligosaccharide glycome reveals key enzymes of their biosynthesis
AG McDonald, J Mariethoz, GP Davey, F Lisacek
Scientific Reports 12 (1), 10846, 2022
132022
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application
I Yamada, MP Campbell, N Edwards, LJ Castro, F Lisacek, J Mariethoz, ...
Glycobiology 31 (7), 741-750, 2021
132021
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Articles 1–20