| Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis BM Tyler, S Tripathy, X Zhang, P Dehal, RHY Jiang, A Aerts, ... Science 313 (5791), 1261-1266, 2006 | 1261 | 2006 |
| Baseline human gut microbiota profile in healthy people and standard reporting template CH King, H Desai, AC Sylvetsky, J LoTempio, S Ayanyan, J Carrie, ... PloS one 14 (9), e0206484, 2019 | 236 | 2019 |
| Araport: the Arabidopsis information portal V Krishnakumar, MR Hanlon, S Contrino, ES Ferlanti, S Karamycheva, ... Nucleic acids research 43 (D1), D1003-D1009, 2015 | 235 | 2015 |
| Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community K Krampis, T Booth, B Chapman, B Tiwari, M Bicak, D Field, KE Nelson BMC bioinformatics 13, 1-8, 2012 | 217 | 2012 |
| Comparing microbiome sampling methods in a wild mammal: fecal and intestinal samples record different signals of host ecology, evolution MR Ingala, NB Simmons, C Wultsch, K Krampis, KA Speer, SL Perkins Frontiers in Microbiology 9, 803, 2018 | 160 | 2018 |
| Tight regulation of expression of two Arabidopsis cytosolic Hsp90 genes during embryo development C Prasinos, K Krampis, D Samakovli, P Hatzopoulos Journal of experimental botany 56 (412), 633-644, 2005 | 111 | 2005 |
| Genetic variants in root architecture-related genes in a Glycine soja accession, a potential resource to improve cultivated soybean SJ Prince, L Song, D Qiu, JV Maldonado dos Santos, C Chai, T Joshi, ... BMC genomics 16, 1-20, 2015 | 102 | 2015 |
| miR-1207-3p regulates the androgen receptor in prostate cancer via FNDC1/fibronectin DK Das, M Naidoo, A Ilboudo, JY Park, T Ali, K Krampis, BD Robinson, ... Experimental cell research 348 (2), 190-200, 2016 | 78 | 2016 |
| Analysis of Genes Underlying Soybean Quantitative Trait Loci Conferring Partial Resistance to Phytophthora sojae H Wang, LC Waller, S Tripathy, SK St. Martin, L Zhou, K Krampis, ... The Plant Genome 3 (1), 2010 | 78 | 2010 |
| Molecular diet analysis of neotropical bats based on fecal DNA metabarcoding MR Ingala, NB Simmons, C Wultsch, K Krampis, KL Provost, SL Perkins Ecology and evolution 11 (12), 7474-7491, 2021 | 61 | 2021 |
| Infection and genotype remodel the entire soybean transcriptome L Zhou, SX Mideros, L Bao, R Hanlon, FD Arredondo, S Tripathy, ... BMC genomics 10, 1-19, 2009 | 61 | 2009 |
| Enabling precision medicine via standard communication of HTS provenance, analysis, and results G Alterovitz, D Dean, C Goble, MR Crusoe, S Soiland-Reyes, A Bell, ... PLoS biology 16 (12), e3000099, 2018 | 40 | 2018 |
| Census-based rapid and accurate metagenome taxonomic profiling A Shamsaddini, Y Pan, WE Johnson, K Krampis, M Shcheglovitova, ... BMC genomics 15, 1-13, 2014 | 29 | 2014 |
| You are more than what you eat: potentially adaptive enrichment of microbiome functions across bat dietary niches MR Ingala, NB Simmons, M Dunbar, C Wultsch, K Krampis, SL Perkins Animal Microbiome 3, 1-17, 2021 | 23 | 2021 |
| Bio-Docklets: virtualization containers for single-step execution of NGS pipelines Krampis K., Kim B., Ali T., Lijeron C., Afgan E. Gigascience 6 (8), 1-7, 2017 | 23* | 2017 |
| Genotyping and Quantifying Lyme Pathogen Strains by Deep Sequencing of the Outer Surface Protein C (ospC) Locus L Di, Z Wan, S Akther, C Ying, A Larracuente, L Li, C Di, R Nunez, ... Journal of clinical microbiology 56 (11), 10.1128/jcm. 00940-18, 2018 | 22 | 2018 |
| MGS-Fast: metagenomic shotgun data fast annotation using microbial gene catalogs SM Brown, H Chen, Y Hao, BP Laungani, TA Ali, C Dong, C Lijeron, ... GigaScience 8 (4), giz020, 2019 | 19 | 2019 |
| Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data C Cole, K Krampis, K Karagiannis, JS Almeida, WJ Faison, M Motwani, ... BMC bioinformatics 15, 1-18, 2014 | 18 | 2014 |
| In Vitro Mutational and Bioinformatics Analysis of the M71 Odorant Receptor and Its Superfamily J Bubnell, S Jamet, D Tomoiaga, C D’Hulst, K Krampis, P Feinstein PLoS One 10 (10), e0141712, 2015 | 15 | 2015 |
| Extensive Variation in Nuclear Mitochondrial DNA Content Between the Genomes of Phytophthora sojae and Phytophthora ramorum K Krampis, BM Tyler, JL Boore Molecular plant-microbe interactions 19 (12), 1329-1336, 2006 | 14 | 2006 |
Thahmina A. AliWeill Cornell Medicine, Memorial Sloan Kettering Cancer Center, Rockefeller UniversityVerified email at mskcc.org
