Wouter Boomsma

Cited by

	All	Since 2019
Citations	3795	2260
h-index	30	21
i10-index	46	34

520

260

130

390

20072008200920102011201220132014201520162017201820192020202120222023202412 22 71 68 89 123 166 153 161 200 206 227 214 279 366 428 461 509

Public access

View all

37 articles

2 articles

available

not available

Based on funding mandates

Co-authors

Kresten Lindorff-LarsenLinderstrøm-Lang Centre for Protein Science, Department of Biology, University of CopenhagenVerified email at bio.ku.dk
Thomas HamelryckDpt. of computer science / Dpt. of biology, University of CopenhagenVerified email at bio.ku.dk
Jes FrellsenAssociate Professor, Technical University of Denmark (DTU)Verified email at dtu.dk
Jesper Ferkinghoff-BorgAssociate Professor, Research Director, Novo Nordisk A/SVerified email at novonordisk.com
Pengfei TianPrincipal Scientist, Flagship Labs 97, Inc. (FL97)Verified email at nih.gov
Sandro BottaroPeptoneVerified email at peptone.io
Birthe B. KragelundProfessor of protein biophysics, University of CopenhagenVerified email at bio.ku.dk
Simon OlssonChalmers University of TechnologyVerified email at chalmers.se
Kanti MardiaSENIOR RESARCH PROFESSOR ,UNIVERSITY OF LEEDS AND UNIVERSITY OF OXFORDVerified email at leeds.ac.uk
Tim HarderResearch Scientist at Philips ResearchVerified email at philips.com
Christian AndreettaUniv. of Copenhagen, Denmark, and Uni Computing, Uni Research, NorwayVerified email at uni.no
Kristoffer Enøe JohanssonDepartment of Biology, University of CopenhagenVerified email at bio.ku.dk
Yong WangZhejiang UniversityVerified email at zju.edu.cn
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Kasper MunchBioinformatics Research Centre, Aarhus UniversityVerified email at daimi.au.dk
Rasmus NielsenUC Berkeley, University of CopenhagenVerified email at sund.ku.dk
Taco CohenQualcomm AI ResearchVerified email at qti.qualcomm.com
Max WellingCAIO CuspAI & Professor Machine Learning, University of AmsterdamVerified email at uva.nl
Maurice WeilerUniversity of AmsterdamVerified email at uva.nl
Mario GeigerMITVerified email at mit.edu

Wouter Boomsma

Professor, Department of Computer Science, University of Copenhagen

Verified email at di.ku.dk

Machine learning Structural Bioinformatics Biomolecular simulations


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
3d steerable cnns: Learning rotationally equivariant features in volumetric data M Weiler, M Geiger, M Welling, W Boomsma, TS Cohen Advances in Neural Information Processing Systems 31, 2018	565	2018
Ancient biomolecules from deep ice cores reveal a forested southern Greenland E Willerslev, E Cappellini, W Boomsma, R Nielsen, MB Hebsgaard, ... Science 317 (5834), 111-114, 2007	558	2007
Statistical assignment of DNA sequences using Bayesian phylogenetics K Munch, W Boomsma, JP Huelsenbeck, E Willerslev, R Nielsen Systematic biology 57 (5), 750-757, 2008	225	2008
A generative, probabilistic model of local protein structure W Boomsma, KV Mardia, CC Taylor, J Ferkinghoff-Borg, A Krogh, ... Proceedings of the National Academy of Sciences 105 (26), 8932-8937, 2008	211	2008
Combining experiments and simulations using the maximum entropy principle W Boomsma, J Ferkinghoff-Borg, K Lindorff-Larsen PLoS computational biology 10 (2), e1003406, 2014	199	2014
Learning meaningful representations of protein sequences NS Detlefsen, S Hauberg, W Boomsma Nature communications 13 (1), 1914, 2022	132	2022
Comparing molecular dynamics force fields in the essential subspace F Martín-García, E Papaleo, P Gomez-Puertas, W Boomsma, ... PLoS One 10 (3), e0121114, 2015	112	2015
Structure of a functional amyloid protein subunit computed using sequence variation P Tian, W Boomsma, Y Wang, DE Otzen, MH Jensen, K Lindorff-Larsen Journal of the American Chemical Society 137 (1), 22-25, 2015	109	2015
The PCNA interaction motifs revisited: thinking outside the PIP-box A Prestel, N Wichmann, JM Martins, R Marabini, N Kassem, SS Broendum, ... Cellular and Molecular Life Sciences 76, 4923-4943, 2019	105	2019
Spherical convolutions and their application in molecular modelling W Boomsma, J Frellsen Advances in neural information processing systems 30, 2017	105	2017
Potentials of mean force for protein structure prediction vindicated, formalized and generalized T Hamelryck, M Borg, M Paluszewski, J Paulsen, J Frellsen, C Andreetta, ... PloS one 5 (11), e13714, 2010	102	2010
Developing and validating COVID-19 adverse outcome risk prediction models from a bi-national European cohort of 5594 patients E Jimenez-Solem, TS Petersen, C Hansen, C Hansen, C Lioma, C Igel, ... Scientific reports 11 (1), 3246, 2021	88	2021
ENCORE: software for quantitative ensemble comparison M Tiberti, E Papaleo, T Bengtsen, W Boomsma, K Lindorff-Larsen PLoS computational biology 11 (10), e1004415, 2015	84	2015
Fast phylogenetic DNA barcoding K Munch, W Boomsma, E Willerslev, R Nielsen Philosophical Transactions of the Royal Society B: Biological Sciences 363 …, 2008	84	2008
Beyond rotamers: a generative, probabilistic model of side chains in proteins T Harder, W Boomsma, M Paluszewski, J Frellsen, KE Johansson, ... BMC bioinformatics 11, 1-13, 2010	82	2010
Rapid protein stability prediction using deep learning representations LM Blaabjerg, MM Kassem, LL Good, N Jonsson, M Cagiada, ... Elife 12, e82593, 2023	77	2023
Barnaba: software for analysis of nucleic acid structures and trajectories S Bottaro, G Bussi, G Pinamonti, S Reißer, W Boomsma, K Lindorff-Larsen Rna 25 (2), 219-231, 2019	67	2019
Inference of structure ensembles of flexible biomolecules from sparse, averaged data S Olsson, J Frellsen, W Boomsma, KV Mardia, T Hamelryck PloS one 8 (11), e79439, 2013	62	2013
Bayesian inference of protein ensembles from SAXS data LD Antonov, S Olsson, W Boomsma, T Hamelryck Physical Chemistry Chemical Physics 18 (8), 5832-5838, 2016	61	2016
Rapid expansion of the protein disulfide isomerase gene family facilitates the folding of venom peptides H Safavi-Hemami, Q Li, RL Jackson, AS Song, W Boomsma, ... Proceedings of the National Academy of Sciences 113 (12), 3227-3232, 2016	53	2016

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors