Beyond rotamers: a generative, probabilistic model of side chains in proteins T Harder, W Boomsma, M Paluszewski, J Frellsen, KE Johansson, ... BMC bioinformatics 11, 1-13, 2010 | 82 | 2010 |
Rapid protein stability prediction using deep learning representations LM Blaabjerg, MM Kassem, LL Good, N Jonsson, M Cagiada, ... Elife 12, e82593, 2023 | 77 | 2023 |
Understanding the origins of loss of protein function by analyzing the effects of thousands of variants on activity and abundance M Cagiada, KE Johansson, A Valanciute, SV Nielsen, ... Molecular Biology and Evolution 38 (8), 3235-3246, 2021 | 73 | 2021 |
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure W Boomsma, J Frellsen, T Harder, S Bottaro, KE Johansson, P Tian, ... Journal of computational chemistry 34 (19), 1697-1705, 2013 | 48 | 2013 |
Structural heterogeneity and dynamics in protein evolution and design KE Johansson, K Lindorff-Larsen Current opinion in structural biology 48, 157-163, 2018 | 44 | 2018 |
A soluble, folded protein without charged amino acid residues C Højgaard, C Kofoed, R Espersen, KE Johansson, M Villa, ... Biochemistry 55 (28), 3949-3956, 2016 | 40 | 2016 |
Tracking Dehydration Mechanisms in Crystalline Hydrates with Molecular Dynamics Simulations AS Larsen, MT Ruggiero, KE Johansson, JA Zeitler, J Rantanen Crystal Growth & Design 17 (10), 5017-5022, 2017 | 35 | 2017 |
Subtle Monte Carlo updates in dense molecular systems S Bottaro, W Boomsma, K E. Johansson, C Andreetta, T Hamelryck, ... Journal of Chemical Theory and Computation 8 (2), 695-702, 2012 | 31 | 2012 |
Global analysis of protein stability by temperature and chemical denaturation L Hamborg, EW Horsted, KE Johansson, M Willemoës, K Lindorff-Larsen, ... Analytical biochemistry 605, 113863, 2020 | 28 | 2020 |
Conserved degronome features governing quality control associated proteolysis B Mashahreh, S Armony, KE Johansson, A Chappleboim, N Friedman, ... Nature Communications 13 (1), 7588, 2022 | 24 | 2022 |
Computational Redesign of Thioredoxin Is Hypersensitive toward Minor Conformational Changes in the Backbone Template KE Johansson, NT Johansen, S Christensen, S Horowitz, JCA Bardwell, ... Journal of Molecular Biology 428 (21), 4361-4377, 2016 | 24 | 2016 |
Distinguishing tautomerism in the crystal structure of (Z)-N-(5-ethyl-2, 3-dihydro-1, 3, 4-thiadiazol-2-ylidene)-4-methylbenzenesulfonamide using DFT-D calculations and 13C … X Li, AD Bond, KE Johansson, J Van de Streek Acta Crystallographica Section C: Structural Chemistry 70 (8), 784-789, 2014 | 21 | 2014 |
Conformational ensembles of the human intrinsically disordered proteome: Bridging chain compaction with function and sequence conservation G Tesei, AI Trolle, N Jonsson, J Betz, F Pesce, KE Johansson, ... bioRxiv, 2023.05. 08.539815, 2023 | 20 | 2023 |
Charge interactions in a highly charge-depleted protein S Hervø-Hansen, C Højgaard, KE Johansson, Y Wang, K Wahni, D Young, ... Journal of the American Chemical Society 143 (6), 2500-2508, 2021 | 18 | 2021 |
Prediction of quality-control degradation signals in yeast proteins KE Johansson, B Mashahreh, R Hartmann-Petersen, T Ravid, ... Journal of Molecular Biology 435 (2), 167915, 2023 | 17 | 2023 |
HSP70-binding motifs function as protein quality control degrons AB Abildgaard, V Voutsinos, SD Petersen, FB Larsen, C Kampmeyer, ... Cellular and Molecular Life Sciences 80 (1), 32, 2023 | 17 | 2023 |
Computational Dehydration of Crystalline Hydrates Using Molecular Dynamics Simulations AS Larsen, J Rantanen, KE Johansson Journal of pharmaceutical sciences 106 (1), 348-355, 2017 | 17 | 2017 |
Revision of the Crystal Structure of the First Molecular Polymorph in History KE Johansson, J van de Streek Crystal Growth & Design 16 (3), 1366-1370, 2016 | 17 | 2016 |
Local structure in the disordered solid solution of cis-and trans-perinones JL Teteruk, J Glinnemann, W Heyse, KE Johansson, J van de Streek, ... Acta Crystallographica Section B: Structural Science, Crystal Engineering …, 2016 | 15 | 2016 |
Characterization of the hydrodynamics in a miniaturized dissolution apparatus KE Johansson, J Plum, M Mosleh, CM Madsen, T Rades, A Müllertz Journal of Pharmaceutical Sciences 107 (4), 1095-1103, 2018 | 10 | 2018 |